Package | Description |
---|---|
de.unirostock.sems.bives.cellml.parser |
Modifier and Type | Field and Description |
---|---|
CellMLComponent |
CellMLConnection.ConnectedComponents.component_1 |
CellMLComponent |
CellMLConnection.ConnectedComponents.component_2 |
Modifier and Type | Method and Description |
---|---|
CellMLComponent |
CellMLReaction.getComponent()
Gets the component defining this reaction.
|
CellMLComponent |
CellMLVariable.getComponent()
Gets the component.
|
CellMLComponent |
CellMLHierarchyNode.getComponent()
Gets the component behind this node.
|
CellMLComponent |
CellMLModel.getComponent(String name)
Gets the component having a specified name.
|
Modifier and Type | Method and Description |
---|---|
HashMap<String,CellMLComponent> |
CellMLModel.getComponents()
Gets the components.
|
Modifier and Type | Method and Description |
---|---|
void |
CellMLModel.addComponent(CellMLComponent component)
Adds a component.
|
void |
CellMLUnitDictionary.addUnit(CellMLComponent c,
CellMLUserUnit u,
boolean imported)
Adds a unit.
|
void |
CellMLHierarchyNetwork.connectHierarchically(CellMLComponent parent,
CellMLComponent kid)
Connect a parent component and its child hierarchically.
|
HashMap<String,CellMLUserUnit> |
CellMLUnitDictionary.getComponentUnits(CellMLComponent component)
Gets the units defined in a certain component.
|
int |
CellMLHierarchy.getEncapsulationRelationship(CellMLComponent component_1,
CellMLComponent component_2)
Gets the encapsulation relationship of two components.
|
CellMLHierarchyNode |
CellMLHierarchyNetwork.getNode(CellMLComponent component)
Gets the node that corresponds to a certain CellML component.
|
CellMLUnit |
CellMLUnitDictionary.getUnit(String name,
CellMLComponent c)
Gets a unit by its name.
|
void |
CellMLModel.importComponent(CellMLComponent component)
Import a component from another document.
|
CellMLHierarchyNode |
CellMLHierarchyNetwork.putNode(CellMLComponent component)
Install a new hierarchy node if it doesn't exist.
|
Modifier and Type | Method and Description |
---|---|
static CellMLConnection.ConnectedComponents |
CellMLConnection.parseConnection(CellMLModel model,
CellMLHierarchy hierarchy,
de.unirostock.sems.xmlutils.ds.DocumentNode connection,
HashMap<String,CellMLComponent> limit)
Parses a connection as defined in a CellML document.
|
Constructor and Description |
---|
CellMLConnection.ConnectedComponents(CellMLComponent component_1,
CellMLComponent component_2)
Instantiates a new component connection.
|
CellMLHierarchyNode(CellMLComponent component)
Instantiates a new CellML hierarchy node.
|
CellMLReaction(CellMLModel model,
CellMLComponent component,
de.unirostock.sems.xmlutils.ds.DocumentNode node)
Instantiates a new CellML reaction.
|
CellMLReactionSubstance(CellMLModel model,
CellMLComponent component,
de.unirostock.sems.xmlutils.ds.DocumentNode node)
Instantiates a new CellML reaction substance.
|
CellMLUserUnit(CellMLModel model,
CellMLUnitDictionary dict,
CellMLComponent component,
de.unirostock.sems.xmlutils.ds.DocumentNode node)
Instantiates a new CellML user unit.
|
CellMLVariable(CellMLModel model,
CellMLComponent component,
de.unirostock.sems.xmlutils.ds.DocumentNode node)
Instantiates a new CellML variable.
|
Copyright © 2015 SEMS project @ University of Rostock. All rights reserved.