Package | Description |
---|---|
de.unirostock.sems.bives.ds.crn |
Modifier and Type | Field and Description |
---|---|
CRNSubstance |
CRNSubstanceRef.subst
The substance.
|
Modifier and Type | Method and Description |
---|---|
CRNSubstance |
CRNSubstanceRef.getSubstance()
Gets the referenced substance.
|
CRNSubstance |
CRN.getSubstance(de.unirostock.sems.xmlutils.ds.TreeNode node)
Gets a substance.
|
Modifier and Type | Method and Description |
---|---|
Collection<CRNSubstance> |
CRN.getSubstances()
Gets the substances.
|
Modifier and Type | Method and Description |
---|---|
void |
CRNReaction.addInputA(CRNSubstance subst,
SBOTerm sbo)
Add a reactant of this reaction in its original version.
|
void |
CRNReaction.addInputB(CRNSubstance subst,
SBOTerm sbo)
Add a reactant of this reaction in its modified version.
|
void |
CRNReaction.addModA(CRNSubstance subst,
SBOTerm sbo)
Adds the modifier of this reaction in its original version.
|
void |
CRNReaction.addModB(CRNSubstance subst,
SBOTerm sbo)
Add a modifier of this reaction in its modified version.
|
void |
CRNReaction.addOutputA(CRNSubstance subst,
SBOTerm sbo)
Add a product of this reaction in its original version.
|
void |
CRNReaction.addOutputB(CRNSubstance subst,
SBOTerm sbo)
Add a product of this reaction in its modified version.
|
void |
CRN.setSubstance(de.unirostock.sems.xmlutils.ds.TreeNode node,
CRNSubstance subst)
Adds a substance.
|
Constructor and Description |
---|
CRNSubstanceRef(CRNSubstance subst,
boolean flagA,
boolean flagB,
SBOTerm modTermA,
SBOTerm modTermB)
Instantiates a new substance reference.
|
Copyright © 2014 SEMS project @ University of Rostock. All rights reserved.