- BivesConnectionException
- BivesDocumentConsistencyException
- BivesException
- BivesFlattenException
- BivesImportException
- BivesLogicalException
- BivesNetworkingException
- BivesTools
- BivesUnsupportedException
- Connector
- DefaultDiffAnnotator
- Diff
- DiffAnnotator
- DiffReporter
- GraphEntity
- GraphProducer
- GraphTranslator
- GraphTranslatorDot
- GraphTranslatorGraphML
- GraphTranslatorJson
- GraphTranslatorSbgnJson
- HierarchyNetwork
- HierarchyNetworkComponent
- HierarchyNetworkEntity
- HierarchyNetworkVariable
- IdConnector
- Interpreter
- LabelConnector
- Markup
- MarkupDocument
- MarkupElement
- MarkupSection
- MathML
- ModelDocument
- ModelValidator
- NodeConnection
- Patch
- PatchProducer
- Producer
- RDF
- RDFDescription
- ReactionNetwork
- ReactionNetworkCompartment
- ReactionNetworkEntity
- ReactionNetworkReaction
- ReactionNetworkSubstance
- ReactionNetworkSubstanceRef
- RegularDiff
- SBOTerm
- SimpleConnectionManager
- Single
- Typesetting
- TypesettingHTML
- TypesettingMarkDown
- TypesettingReStructuredText
- Xhtml
- XyDiffConnector