public class SBMLGraphProducer
extends de.unirostock.sems.bives.algorithm.GraphProducer
Constructor and Description |
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SBMLGraphProducer(SBMLDocument sbmlDoc)
Instantiates a new SBML graph producer for single document graphs.
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SBMLGraphProducer(de.unirostock.sems.bives.algorithm.SimpleConnectionManager conMgmt,
SBMLDocument sbmlDocA,
SBMLDocument sbmlDocB)
Instantiates a new SBML graph producer for difference graphs.
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Modifier and Type | Method and Description |
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protected void |
processCrnA()
Process Chemical Reaction Network of the original document.
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protected void |
processCrnB()
Process Chemical Reaction Network of the modified document.
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protected void |
produceCRN() |
protected void |
produceHierarchyGraph() |
public SBMLGraphProducer(de.unirostock.sems.bives.algorithm.SimpleConnectionManager conMgmt, SBMLDocument sbmlDocA, SBMLDocument sbmlDocB)
conMgmt
- the connection managersbmlDocA
- the original documentsbmlDocB
- the modified documentpublic SBMLGraphProducer(SBMLDocument sbmlDoc)
sbmlDoc
- the SBML documentprotected void produceCRN()
produceCRN
in class de.unirostock.sems.bives.algorithm.GraphProducer
protected void produceHierarchyGraph()
produceHierarchyGraph
in class de.unirostock.sems.bives.algorithm.GraphProducer
protected void processCrnA() throws de.unirostock.sems.bives.exception.BivesUnsupportedException
de.unirostock.sems.bives.exception.BivesUnsupportedException
- the bives unsupported exceptionprotected void processCrnB() throws de.unirostock.sems.bives.exception.BivesUnsupportedException
de.unirostock.sems.bives.exception.BivesUnsupportedException
- the bives unsupported exceptionCopyright © 2014 SEMS project @ University of Rostock. All rights reserved.