Class SBMLAssignmentRule

  • All Implemented Interfaces:
    de.unirostock.sems.bives.algorithm.DiffReporter

    public class SBMLAssignmentRule
    extends SBMLRule
    The Class SBMLAssignmentRule used to express equations that set the values of variables.
    Author:
    Martin Scharm
    • Constructor Detail

      • SBMLAssignmentRule

        public SBMLAssignmentRule​(de.unirostock.sems.xmlutils.ds.DocumentNode documentNode,
                                  SBMLModel sbmlModel)
                           throws BivesSBMLParseException
        Instantiates a new SBML assignment rule.
        Parameters:
        documentNode - the corresponding document node in the XML tree
        sbmlModel - the SBML model
        Throws:
        BivesSBMLParseException - the bives sbml parse exception
    • Method Detail

      • getVariable

        public SBMLSBase getVariable()
        Gets the corresponding variable.
        Returns:
        the variable
      • reportModification

        public de.unirostock.sems.bives.markup.MarkupElement reportModification​(de.unirostock.sems.bives.algorithm.SimpleConnectionManager conMgmt,
                                                                                de.unirostock.sems.bives.algorithm.DiffReporter docA,
                                                                                de.unirostock.sems.bives.algorithm.DiffReporter docB)
      • reportInsert

        public de.unirostock.sems.bives.markup.MarkupElement reportInsert()
      • reportDelete

        public de.unirostock.sems.bives.markup.MarkupElement reportDelete()