Class SBMLFunctionDefinition

  • All Implemented Interfaces:
    de.unirostock.sems.bives.algorithm.DiffReporter

    public class SBMLFunctionDefinition
    extends SBMLGenericIdNameObject
    implements de.unirostock.sems.bives.algorithm.DiffReporter
    The Class SBMLFunctionDefinition associates an identifier with a function definition.
    Author:
    Martin Scharm
    • Constructor Detail

      • SBMLFunctionDefinition

        public SBMLFunctionDefinition​(de.unirostock.sems.xmlutils.ds.DocumentNode functionDefinition,
                                      SBMLModel sbmlModel)
                               throws BivesSBMLParseException
        Instantiates a new SBML function definition.
        Parameters:
        functionDefinition - the document node encoding this entity in the corresponding XML tree
        sbmlModel - the SBML model
        Throws:
        BivesSBMLParseException - the bives sbml parse exception
    • Method Detail

      • getMath

        public de.unirostock.sems.bives.ds.MathML getMath()
        Gets the math.
        Returns:
        the math
      • reportModification

        public de.unirostock.sems.bives.markup.MarkupElement reportModification​(de.unirostock.sems.bives.algorithm.SimpleConnectionManager conMgmt,
                                                                                de.unirostock.sems.bives.algorithm.DiffReporter docA,
                                                                                de.unirostock.sems.bives.algorithm.DiffReporter docB)
        Specified by:
        reportModification in interface de.unirostock.sems.bives.algorithm.DiffReporter
      • reportInsert

        public de.unirostock.sems.bives.markup.MarkupElement reportInsert()
        Specified by:
        reportInsert in interface de.unirostock.sems.bives.algorithm.DiffReporter
      • reportDelete

        public de.unirostock.sems.bives.markup.MarkupElement reportDelete()
        Specified by:
        reportDelete in interface de.unirostock.sems.bives.algorithm.DiffReporter